Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl/aryl-sulfatase | RCA23_RS05615 | Not Available | Negative | 1185640 - 1186917 | 46804.8 |
| trap transporter substrate-binding protein dctp | RCA23_RS05620 | Not Available | Positive | 1187177 - 1188193 | 36468.5 |
| glutathione s-transferase n-terminal domain-containing protein | RCA23_RS05625 | Not Available | Positive | 1188273 - 1189034 | 28996.8 |
| trap transporter small permease | RCA23_RS05630 | Not Available | Positive | 1189053 - 1189601 | 20194.5 |
| trap transporter large permease | RCA23_RS05635 | Not Available | Positive | 1189598 - 1190959 | 48206.3 |
| dmt family transporter | RCA23_RS05640 | Not Available | Positive | 1190995 - 1191909 | 33070.5 |
| hypothetical protein | RCA23_RS16620 | Not Available | Positive | 1192108 - 1192302 | 7376.51 |
| hypothetical protein | RCA23_RS05650 | Not Available | Negative | 1192559 - 1192990 | 15848.9 |
| osmc family protein | RCA23_RS05655 | Not Available | Negative | 1192992 - 1194176 | 42775.8 |
| sulfatase-like hydrolase/transferase | RCA23_RS05660 | Not Available | Negative | 1194217 - 1195854 | 62429.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
