Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6538 domain-containing protein | RCA23_RS05555 | Not Available | Positive | 1168102 - 1169268 | 43387.0 |
| hypothetical protein | RCA23_RS05560 | Not Available | Negative | 1169922 - 1173155 | 120046.0 |
| tetratricopeptide repeat protein | RCA23_RS15950 | Not Available | Positive | 1173220 - 1175214 | 74301.1 |
| recombinase family protein | RCA23_RS05575 | Not Available | Negative | 1176257 - 1177861 | 60846.2 |
| duf2924 domain-containing protein | RCA23_RS05580 | Not Available | Negative | 1177858 - 1178253 | 14851.0 |
| taxi family trap transporter solute-binding subunit | RCA23_RS05590 | Not Available | Positive | 1178793 - 1179848 | 37164.6 |
| trap transporter fused permease subunit | RCA23_RS05595 | Not Available | Positive | 1179941 - 1182292 | 84819.9 |
| sulfatase | RCA23_RS05600 | Not Available | Positive | 1182304 - 1183887 | 59151.5 |
| mbl fold metallo-hydrolase | RCA23_RS05605 | Not Available | Positive | 1183893 - 1184789 | 32561.4 |
| siderophore-interacting protein | RCA23_RS05610 | Not Available | Positive | 1184822 - 1185622 | 29500.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
