Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS05510 | Not Available | Positive | 1157331 - 1157729 | 14961.2 |
| Tmrna,resume consensus sequence (at 200): gctagttgcaaatgacaa | Not Available | Not Available | Positive | 1157753 - 1158088 | Not Available |
| acryloyl-coa reductase | RCA23_RS05515 | Not Available | Positive | 1158217 - 1159203 | 34252.5 |
| aminotransferase class v-fold plp-dependent enzyme | RCA23_RS05520 | Not Available | Positive | 1159306 - 1160529 | 44521.8 |
| cryptochrome/photolyase family protein | RCA23_RS05525 | Not Available | Positive | 1160550 - 1161962 | 52391.4 |
| sam-dependent methyltransferase | RCA23_RS05530 | Not Available | Positive | 1162037 - 1163245 | 46017.3 |
| nudix domain-containing protein | RCA23_RS05535 | Not Available | Positive | 1163253 - 1164371 | 40357.0 |
| cysteine synthase a | RCA23_RS05540 | Not Available | Positive | 1164420 - 1165454 | 36312.4 |
| duf3772 domain-containing protein | RCA23_RS05545 | Not Available | Positive | 1165423 - 1167759 | 83599.6 |
| Trna-ser | Not Available | Not Available | Positive | 1167912 - 1168001 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
