Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | RCA23_RS05465 | Not Available | Positive | 1147211 - 1148374 | 41857.5 |
| gtp 3',8-cyclase moaa | RCA23_RS05470 | Not Available | Negative | 1148371 - 1149375 | 37096.7 |
| amp-binding protein | RCA23_RS05475 | Not Available | Positive | 1149576 - 1151222 | 59982.1 |
| ribbon-helix-helix domain-containing protein | RCA23_RS16220 | Not Available | Negative | 1151173 - 1151400 | 8422.38 |
| duf4169 family protein | RCA23_RS05485 | Not Available | Negative | 1151397 - 1151573 | 6630.88 |
| class ii fumarate hydratase | RCA23_RS05490 | Not Available | Negative | 1151570 - 1152961 | 49203.3 |
| sspb family protein | RCA23_RS05495 | Not Available | Negative | 1153036 - 1153500 | 17728.9 |
| chromate efflux transporter | RCA23_RS05500 | Not Available | Negative | 1153572 - 1154840 | 45076.1 |
| hypothetical protein | RCA23_RS16430 | Not Available | Negative | 1154862 - 1154999 | 4860.81 |
| hydantoinase/oxoprolinase n-terminal domain-containing protein | RCA23_RS05505 | Not Available | Positive | 1155228 - 1157231 | 69948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
