Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bola/ibag family iron-sulfur metabolism protein | RCA23_RS05415 | Not Available | Positive | 1133529 - 1133801 | 10010.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | RCA23_RS05420 | Not Available | Negative | 1133825 - 1135336 | 55443.7 |
| aminopeptidase n | RCA23_RS05425 | Not Available | Negative | 1135425 - 1137977 | 94322.8 |
| malate synthase g | RCA23_RS05430 | Not Available | Positive | 1138196 - 1140334 | 76673.6 |
| glcg/hbps family heme-binding protein | RCA23_RS05435 | Not Available | Positive | 1140396 - 1140824 | 14397.6 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | RCA23_RS05440 | Not Available | Positive | 1141119 - 1141883 | 27588.0 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS05445 | Not Available | Negative | 1141880 - 1142635 | 26595.9 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | RCA23_RS05450 | Not Available | Positive | 1142794 - 1144365 | 55315.3 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | RCA23_RS05455 | Not Available | Positive | 1144379 - 1145812 | 49962.6 |
| duf3422 family protein | RCA23_RS05460 | Not Available | Positive | 1145880 - 1147163 | 47414.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
