Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsa | RCA23_RS05365 | Not Available | Positive | 1120748 - 1122082 | 47981.4 |
| cell division protein ftsz | RCA23_RS05370 | Not Available | Positive | 1122248 - 1123780 | 53303.9 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | RCA23_RS05375 | Not Available | Positive | 1123992 - 1124912 | 32734.5 |
| outer membrane protein assembly factor bamd | RCA23_RS05380 | Not Available | Positive | 1125005 - 1125835 | 31908.7 |
| dna repair protein recn | RCA23_RS05385 | Not Available | Positive | 1125852 - 1127504 | 59348.5 |
| duf427 domain-containing protein | RCA23_RS05390 | Not Available | Negative | 1127501 - 1127845 | 12820.2 |
| aminopeptidase p family protein | RCA23_RS05395 | Not Available | Negative | 1127879 - 1129669 | 64663.6 |
| cobaltochelatase subunit cobt | RCA23_RS05400 | Not Available | Negative | 1129756 - 1131633 | 69467.1 |
| cobaltochelatase subunit cobs | RCA23_RS05405 | Not Available | Negative | 1131668 - 1132654 | 36855.6 |
| dnaj domain-containing protein | RCA23_RS05410 | Not Available | Negative | 1132833 - 1133462 | 24169.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
