Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | RCA23_RS00500 | Not Available | Negative | 102623 - 103282 | 22658.0 |
| endonuclease iii | RCA23_RS00505 | Not Available | Positive | 103461 - 104105 | 23813.8 |
| adenosine kinase | RCA23_RS00510 | Not Available | Positive | 104102 - 105094 | 34865.4 |
| sulfotransferase family protein | RCA23_RS00515 | Not Available | Negative | 105104 - 105925 | 31575.3 |
| yjbh domain-containing protein | RCA23_RS00520 | Not Available | Positive | 106040 - 107617 | 61144.5 |
| hit domain-containing protein | RCA23_RS00525 | Not Available | Positive | 107628 - 108008 | 13830.5 |
| abc transporter atp-binding protein | RCA23_RS00530 | Not Available | Negative | 108024 - 108944 | 32976.9 |
| zinc-finger domain-containing protein | RCA23_RS00535 | Not Available | Positive | 109043 - 109222 | 6599.81 |
| hypothetical protein | RCA23_RS00540 | Not Available | Negative | 109233 - 109664 | 15607.2 |
| dna polymerase i | RCA23_RS00545 | Not Available | Positive | 109753 - 112548 | 101648.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
