Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS15940 | Not Available | Negative | 1110842 - 1111030 | 7293.77 |
| hypothetical protein | RCA23_RS15945 | Not Available | Positive | 1111195 - 1111935 | 28111.3 |
| nad(p)/fad-dependent oxidoreductase | RCA23_RS05325 | Not Available | Negative | 1111963 - 1113153 | 42136.7 |
| ftsw/roda/spove family cell cycle protein | RCA23_RS05330 | Not Available | Positive | 1113274 - 1114434 | 41483.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | RCA23_RS05335 | Not Available | Positive | 1114436 - 1115530 | 38305.4 |
| udp-n-acetylmuramate--l-alanine ligase | RCA23_RS05340 | Not Available | Positive | 1115530 - 1116921 | 49510.1 |
| dmt family transporter | RCA23_RS05345 | Not Available | Negative | 1116925 - 1117803 | 30965.1 |
| udp-n-acetylmuramate dehydrogenase | RCA23_RS05350 | Not Available | Positive | 1117934 - 1118863 | 33258.7 |
| d-alanine--d-alanine ligase | RCA23_RS05355 | Not Available | Positive | 1118929 - 1119843 | 32842.2 |
| cell division protein ftsq/divib | RCA23_RS05360 | Not Available | Positive | 1119831 - 1120751 | 34024.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
