Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase hisb | RCA23_RS05215 | Not Available | Negative | 1086823 - 1087410 | 21608.7 |
| Trna-gly | Not Available | Not Available | Positive | 1087773 - 1087847 | Not Available |
| metallophosphoesterase | RCA23_RS05225 | Not Available | Negative | 1087954 - 1088751 | 28995.0 |
| pyruvate carboxylase | RCA23_RS05230 | Not Available | Negative | 1088778 - 1092218 | 125086.0 |
| alpha-hydroxy acid oxidase | RCA23_RS05235 | Not Available | Negative | 1092374 - 1093522 | 41449.2 |
| atp-dependent helicase | RCA23_RS05240 | Not Available | Positive | 1093655 - 1096048 | 88416.1 |
| nad(p)/fad-dependent oxidoreductase | RCA23_RS05245 | Not Available | Positive | 1096133 - 1097425 | 46062.5 |
| lyse family translocator | RCA23_RS05250 | Not Available | Negative | 1097444 - 1098046 | 21474.9 |
| duf1127 domain-containing protein | RCA23_RS16215 | Not Available | Negative | 1098226 - 1098357 | 4737.8 |
| mrp/nbp35 family atp-binding protein | RCA23_RS05260 | Not Available | Positive | 1098622 - 1099686 | 36947.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
