Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | RCA23_RS05030 | Not Available | Negative | 1054651 - 1055169 | 18460.3 |
| methylenetetrahydrofolate reductase | RCA23_RS05035 | Not Available | Negative | 1055225 - 1056046 | 29407.0 |
| lysr family transcriptional regulator | RCA23_RS05040 | Not Available | Positive | 1056143 - 1057048 | 34038.1 |
| inositol monophosphatase family protein | RCA23_RS05045 | Not Available | Positive | 1057107 - 1057898 | 28175.8 |
| hypothetical protein | RCA23_RS05050 | Not Available | Positive | 1058013 - 1058552 | 19898.1 |
| Trna-leu | Not Available | Not Available | Positive | 1058600 - 1058685 | Not Available |
| helix-turn-helix domain-containing protein | RCA23_RS15935 | Not Available | Negative | 1058798 - 1059277 | 18314.2 |
| hypothetical protein | RCA23_RS16415 | Not Available | Negative | 1059249 - 1059398 | 5526.74 |
| hypothetical protein | RCA23_RS05065 | Not Available | Positive | 1059447 - 1059785 | 12296.8 |
| nuclear transport factor 2 family protein | RCA23_RS05070 | Not Available | Positive | 1059839 - 1060168 | 12350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
