Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS04930 | Not Available | Negative | 1031611 - 1032099 | 17511.3 |
| endopeptidase la | RCA23_RS04935 | Not Available | Positive | 1032374 - 1034782 | 88161.6 |
| histidine phosphatase family protein | RCA23_RS04940 | Not Available | Positive | 1034823 - 1035461 | 23058.7 |
| Trna-val | Not Available | Not Available | Positive | 1035517 - 1035592 | Not Available |
| protein-l-isoaspartate o-methyltransferase family protein | RCA23_RS04950 | Not Available | Positive | 1035777 - 1036430 | 23429.3 |
| tolc family outer membrane protein | RCA23_RS04955 | Not Available | Positive | 1036466 - 1037830 | 48567.6 |
| hypothetical protein | RCA23_RS04960 | Not Available | Positive | 1037881 - 1038228 | 12386.7 |
| cobyric acid synthase | RCA23_RS04965 | Not Available | Negative | 1038262 - 1039719 | 51594.9 |
| duf6280 family protein | RCA23_RS04970 | Not Available | Negative | 1039917 - 1040228 | 11269.2 |
| elongation factor p | RCA23_RS04975 | Not Available | Positive | 1040445 - 1041008 | 21057.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
