Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | RCA23_RS04880 | Not Available | Negative | 1021499 - 1022656 | 42999.4 |
| dctp family trap transporter solute-binding subunit | RCA23_RS04885 | Not Available | Positive | 1022810 - 1023811 | 35937.5 |
| trap transporter small permease | RCA23_RS04890 | Not Available | Positive | 1023876 - 1024568 | 26341.3 |
| trap transporter large permease | RCA23_RS16905 | Not Available | Positive | 1024573 - 1026420 | 64229.5 |
| slc13 family permease | RCA23_RS04900 | Not Available | Positive | 1026486 - 1028369 | 67207.9 |
| triose-phosphate isomerase | RCA23_RS04905 | Not Available | Negative | 1028366 - 1029097 | 25062.9 |
| tfox/sxy family protein | RCA23_RS04910 | Not Available | Negative | 1029137 - 1029454 | 11169.5 |
| iron-sulfur cluster assembly accessory protein | RCA23_RS04915 | Not Available | Negative | 1029451 - 1029816 | 13201.1 |
| suf system fe-s cluster assembly protein | RCA23_RS04920 | Not Available | Negative | 1029936 - 1030295 | 13028.5 |
| trna guanosine(34) transglycosylase tgt | RCA23_RS04925 | Not Available | Positive | 1030469 - 1031599 | 41805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
