Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS00450 | Not Available | Positive | 95721 - 96575 | 32020.8 |
| tyrosine-type recombinase/integrase | RCA23_RS00455 | Not Available | Negative | 96589 - 98067 | 57196.1 |
| Trna-arg | Not Available | Not Available | Positive | 98346 - 98422 | Not Available |
| metalloregulator arsr/smtb family transcription factor | RCA23_RS00465 | Not Available | Negative | 98478 - 98804 | 11991.3 |
| atpz/atpi family protein | RCA23_RS00470 | Not Available | Positive | 99032 - 99355 | 11838.7 |
| f0f1 atp synthase subunit a | RCA23_RS00475 | Not Available | Positive | 99411 - 100142 | 26358.3 |
| f0f1 atp synthase subunit c | RCA23_RS00480 | Not Available | Positive | 100189 - 100425 | 7627.58 |
| f0f1 atp synthase subunit b' | RCA23_RS00485 | Not Available | Positive | 100497 - 101036 | 18697.3 |
| f0f1 atp synthase subunit b | RCA23_RS00490 | Not Available | Positive | 101040 - 101597 | 19608.7 |
| fcd domain-containing protein | RCA23_RS00495 | Not Available | Negative | 101736 - 102506 | 28763.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
