Subdoligranulum sp. 4_3_54A2FAA

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum sp. 4_3_54A2FAA is a Gram-positive bacterium characterized by its unique cellular structure and potential metabolic capabilities. As a member of the diverse microbial community, this species is notable for its Gram-positive nature, which suggests a thicker peptidoglycan layer in its cell wall compared to Gram-negative counterparts. This structural feature may confer stability and protection in various environmental conditions. The specific physiological and metabolic pathways of Subdoligranulum sp. 4_3_54A2FAA remain to be elucidated; however, Gram-positive bacteria are often associated with fermentative metabolism or the ability to utilize complex carbohydrates. This metabolic flexibility may allow Subdoligranulum sp. 4_3_54A2FAA to thrive in diverse niches, potentially contributing to the cycling of nutrients in its ecosystem. In summary, while much remains to be discovered regarding the functional roles and ecological interactions of Subdoligranulum sp. 4_3_54A2FAA, its Gram-positive characteristic indicates a robust cellular architecture that may support its survival and adaptability in varied environments. Understanding the ecological roles of such microorganisms can provide insights into microbial diversity and the intricate relationships within their habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum sp. 4_3_54A2FAA
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum sp. 4_3_54A2FAA cont1.103, whole genome shotgun

Gene Summary

Adenine Count

918786 bp

Thymine Count

923839 bp

Guanine Count

1182106 bp

Cytosine Count

1180506 bp

Genome Length

4205237 bp

Protein-coding Genes

3928 genes

Non-Coding Genes

244 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinHMPREF1032_02293Not AvailableNegative659489 - 66061641385.9
Hypothetical proteinHMPREF1032_02294Not AvailableNegative660613 - 66099913770.4
AttrNot AvailableNot AvailablePositive672470 - 672481Not Available
Gp51HMPREF1032_03601Not AvailablePositive1295983 - 129668425885.0
Putative dna translocaseHMPREF1032_03602Not AvailablePositive1296686 - 129722219633.7
hypothetical proteinHMPREF1032_03603Not AvailablePositive1297237 - 129792626111.7
Hypothetical proteinHMPREF1032_03604Not AvailablePositive1297978 - 129843616773.4
hypothetical proteinHMPREF1032_03605Not AvailablePositive1298429 - 12986056730.88
hypothetical proteinHMPREF1032_03606Not AvailablePositive1298598 - 129888210835.7
hypothetical proteinHMPREF1032_03607Not AvailablePositive1298879 - 12990586856.26

Displaying genes 51 – 60 of 4172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

40 records
Metabolite IDMetabolite nameStructureCAS number
BASm0012579N-acetyl-D-glutamateC7H9NO5Not availableNot available
Average187.152Da
Monoisotopic187.049169554Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014044Orotic acidC5H4N2O4Chemical structure of Orotic acid65-86-1
Average156.0963Da
Monoisotopic156.017106626Da
BASm0014068Nicotinic acidC6H5NO2Chemical structure of Nicotinic acid59-67-6
Average123.1094Da
Monoisotopic123.032028409Da
BASm0014102cis-4-Hydroxycyclohexylacetic acidC8H14O3Chemical structure of cis-4-Hydroxycyclohexylacetic acidNULL
Average158.195Da
Monoisotopic158.094294314Da
BASm0014107gamma-GlutamylphenylalanineC14H18N2O5Chemical structure of gamma-GlutamylphenylalanineNULL
Average294.3031Da
Monoisotopic294.121571696Da
BASm0014115N-Acetyl-L-tyrosineC11H13NO4Chemical structure of N-Acetyl-L-tyrosineNULL
Average223.2252Da
Monoisotopic223.084457909Da
BASm0014123Dimethylmalonic acidC5H8O4Chemical structure of Dimethylmalonic acidNULL
Average132.1146Da
Monoisotopic132.042258744Da
BASm0014134DeoxyriboseC5H10O4Chemical structure of DeoxyriboseNULL
Average134.1305Da
Monoisotopic134.057908808Da
BASm0014138N-a-Acetyl-L-arginineC8H16N4O3Chemical structure of N-a-Acetyl-L-arginineNULL
Average216.2376Da
Monoisotopic216.122240398Da

Displaying 1–10 of 40 metabolites

Health Effects

No health effects information available for this bacterium.