Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum sp. 4_3_54A2FAA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
918786 bp
Thymine Count
923839 bp
Guanine Count
1182106 bp
Cytosine Count
1180506 bp
Genome Length
4205237 bp
Protein-coding Genes
3928 genes
Non-Coding Genes
244 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1032_03009 | Not Available | Negative | 2023247 - 2023672 | 15830.6 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | HMPREF1032_03010 | Not Available | Negative | 2023925 - 2024941 | 36998.8 |
| 3-dehydroquinate dehydratase, type ii | HMPREF1032_03011 | Not Available | Negative | 2025050 - 2025493 | 16145.5 |
| shikimate 5-dehydrogenase | HMPREF1032_03012 | Not Available | Negative | 2025474 - 2026724 | 44705.1 |
| chorismate synthase | HMPREF1032_03013 | Not Available | Negative | 2026709 - 2027830 | 38970.5 |
| 3-dehydroquinate synthase | HMPREF1032_03014 | Not Available | Negative | 2027827 - 2028843 | 36727.7 |
| chorismate mutase | HMPREF1032_03015 | Not Available | Negative | 2028913 - 2030007 | 39953.6 |
| hypothetical protein | HMPREF1032_03016 | Not Available | Positive | 2030273 - 2031262 | 34788.4 |
| hypothetical protein | HMPREF1032_03017 | Not Available | Negative | 2031342 - 2032505 | 42586.3 |
| hypothetical protein | HMPREF1032_03018 | Not Available | Negative | 2032519 - 2032761 | 9294.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
