Prosthecomicrobium hirschii str. 16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Ancalomicrobiaceae

Genus

Prosthecodimorpha

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAncalomicrobiaceae
GenusProsthecodimorpha
SpeciesProsthecodimorpha hirschii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prosthecomicrobium hirschii strain 16 C6, whole genome shotgun

Gene Summary

Adenine Count

1007120 bp

Thymine Count

1004250 bp

Guanine Count

2225950 bp

Cytosine Count

2223313 bp

Genome Length

6484983 bp

Protein-coding Genes

5468 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiation proteinABB55_10500A4YJ98Positive2397267 - 239871253900.7
4-hydroxy-tetrahydrodipicolinate reductaseABB55_10505Q11CB4Positive2398899 - 239971428182.0
phosphoglyceromutaseABB55_10510Q21CH5Positive2399728 - 240034822878.5
hypothetical proteinABB55_10515Not AvailablePositive2400704 - 240117415613.2
hypothetical proteinABB55_10520Not AvailablePositive2401284 - 24014997300.25
cytochrome d terminal oxidase subunit 1ABB55_10525Q09049Positive2401543 - 240310557504.5
cytochrome d ubiquinol oxidase subunit 2ABB55_10530P26458Positive2403119 - 240427041160.1
cytochrome bd biosynthesis proteinABB55_10535Not AvailablePositive2404289 - 24043963989.82
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseABB55_10540P15925Negative2404504 - 240586547537.3
acetyl-coa carboxylase carboxyl transferase subunit betaABB55_10545A8HQ90Negative2405893 - 240679533156.5

Displaying genes 2111 – 2120 of 2242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

173 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 173 metabolites

Health Effects

No health effects information available for this bacterium.