Prosthecomicrobium hirschii str. 16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Ancalomicrobiaceae

Genus

Prosthecodimorpha

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAncalomicrobiaceae
GenusProsthecodimorpha
SpeciesProsthecodimorpha hirschii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prosthecomicrobium hirschii strain 16 C6, whole genome shotgun

Gene Summary

Adenine Count

1007120 bp

Thymine Count

1004250 bp

Guanine Count

2225950 bp

Cytosine Count

2223313 bp

Genome Length

6484983 bp

Protein-coding Genes

5468 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseABB55_06905Q576D9Positive1596411 - 159718427936.2
sulfonate abc transporter atp-binding proteinABB55_06910Not AvailablePositive1597181 - 159796628690.9
acetyl-coa acetyltransferaseABB55_06920O32177Positive1599880 - 160101638721.8
3-hydroxyacyl-coa dehydrogenaseABB55_06925O32178Positive1601016 - 160334082703.7
acyl-coa dehydrogenaseABB55_06930Not AvailablePositive1603356 - 160514364079.0
hypothetical proteinABB55_06935Not AvailablePositive1605329 - 160567912008.6
hypothetical proteinABB55_06940Not AvailableNegative1606131 - 160711435396.0
hypothetical proteinABB55_06945Not AvailableNegative1607183 - 160776720299.5
hypothetical proteinABB55_06950O87386Negative1607764 - 1610694103040.0
hypothetical proteinABB55_06955Not AvailableNegative1610691 - 16109549871.9

Displaying genes 1411 – 1420 of 2242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

173 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 173 metabolites

Health Effects

No health effects information available for this bacterium.