Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1214292 bp
Thymine Count
1216369 bp
Guanine Count
1685868 bp
Cytosine Count
1679568 bp
Genome Length
5831912 bp
Protein-coding Genes
5273 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate 1,2-dioxygenase beta subunit | ALR00_03925 | Not Available | Positive | 5097201 - 5097710 | 19727.2 |
| benzoate dioxygenase, ferredoxin reductase component | ALR00_03926 | Not Available | Positive | 5097726 - 5098748 | 37154.9 |
| muconate cycloisomerase | ALR00_03927 | Not Available | Positive | 5098806 - 5099927 | 40150.7 |
| catechol 1,2-dioxygenase | ALR00_03928 | Not Available | Positive | 5100296 - 5101225 | 34482.3 |
| ribosomal-protein-s5p-alanine acetyltransferase | ALR00_03929 | Not Available | Positive | 5101645 - 5102190 | 20764.8 |
| outer membrane protein | ALR00_03930 | Not Available | Negative | 5102211 - 5103644 | 51571.2 |
| hlyd family secretion protein | ALR00_03931 | Not Available | Negative | 5103641 - 5104525 | 32753.2 |
| putative membrane protein | ALR00_03932 | Not Available | Negative | 5104522 - 5104731 | 7735.84 |
| hypothetical protein | ALR00_05322 | Not Available | Negative | 5104728 - 5106815 | 77615.0 |
| marr family transcriptional regulator | ALR00_03934 | Not Available | Negative | 5106812 - 5107264 | 16068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







