Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1214292 bp
Thymine Count
1216369 bp
Guanine Count
1685868 bp
Cytosine Count
1679568 bp
Genome Length
5831912 bp
Protein-coding Genes
5273 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALR00_00266 | Not Available | Negative | 4913987 - 4914607 | 22722.6 |
| bnr/asp-box repeat protein | ALR00_00267 | Not Available | Negative | 4914604 - 4915902 | 47181.7 |
| nickel-dependent hydrogenase b-type cytochrome subunit | ALR00_00268 | Not Available | Negative | 4915941 - 4916486 | 20612.3 |
| hypothetical protein | ALR00_00269 | Not Available | Negative | 4916486 - 4916749 | 9865.91 |
| putative dna-binding response regulator qseb | ALR00_00270 | Not Available | Positive | 4916918 - 4917580 | 24703.1 |
| sensor histidine kinase qsec | ALR00_101246 | Not Available | Positive | 4917397 - 4918950 | 57587.3 |
| l-pipecolate oxidase | ALR00_100166 | Not Available | Negative | 4918963 - 4920252 | 45816.5 |
| delta 1-piperideine-6-carboxylate dehydrogenase | ALR00_00271 | Not Available | Negative | 4920295 - 4921860 | 56488.3 |
| 5-aminovalerate aminotransferase / 4-aminobutyrate aminotransferase | ALR00_00272 | Not Available | Positive | 4922039 - 4923286 | 44315.4 |
| putative cytoplasmic protein | ALR00_00273 | Not Available | Positive | 4923310 - 4924689 | 51028.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







