Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1214292 bp
Thymine Count
1216369 bp
Guanine Count
1685868 bp
Cytosine Count
1679568 bp
Genome Length
5831912 bp
Protein-coding Genes
5273 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase d | ALR00_00248 | Not Available | Positive | 3938339 - 3938929 | 21233.1 |
| hypothetical protein | ALR00_03096 | Not Available | Negative | 3939810 - 3940202 | 14372.3 |
| bnr/asp-box repeat protein | ALR00_03820 | Not Available | Positive | 3940338 - 3941387 | 37101.4 |
| hypothetical protein | ALR00_03821 | Not Available | Positive | 3941415 - 3943805 | 87611.5 |
| transcriptional regulator of the arabinose operon in shewanella | ALR00_100596 | Not Available | Negative | 3944055 - 3944819 | 28414.3 |
| dihydroxy-acid dehydratase | ALR00_05297 | Not Available | Negative | 3944862 - 3946607 | 62355.2 |
| major facilitator family transporter | ALR00_03823 | Not Available | Positive | 3946819 - 3948132 | 47933.9 |
| fumarylacetoacetate hydrolase-like protein | ALR00_05298 | Not Available | Positive | 3947778 - 3949160 | 50395.0 |
| hypothetical protein | ALR00_03825 | Not Available | Positive | 3949279 - 3949572 | 10887.5 |
| 3-carboxymuconate cye | ALR00_03826 | Not Available | Positive | 3949653 - 3950825 | 42840.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







