Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1214292 bp
Thymine Count
1216369 bp
Guanine Count
1685868 bp
Cytosine Count
1679568 bp
Genome Length
5831912 bp
Protein-coding Genes
5273 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain protein | ALR00_01010 | Not Available | Negative | 1747224 - 1748417 | 43739.6 |
| hypothetical protein | ALR00_01011 | Not Available | Positive | 1748640 - 1748777 | 5151.02 |
| sensory box/ggdef protein | ALR00_01012 | Not Available | Positive | 1748774 - 1750972 | 81754.6 |
| 4-hydroxyphenylpyruvate dioxygenase | ALR00_04485 | Not Available | Negative | 1751031 - 1752152 | 42042.3 |
| maleylacetoacetate isomerase | ALR00_100436 | Not Available | Negative | 1752252 - 1752887 | 23566.2 |
| glycolate dehydrogenase, subunit glcd | ALR00_01014 | Not Available | Positive | 1752948 - 1754546 | 57268.6 |
| glycolate dehydrogenase, fad-binding subunit glce | ALR00_01015 | Not Available | Positive | 1754546 - 1755604 | 37998.7 |
| glycolate dehydrogenase, iron-sulfur subunit glcf | ALR00_04486 | Not Available | Positive | 1755319 - 1756839 | 55212.7 |
| glcg protein | ALR00_01017 | Not Available | Positive | 1756875 - 1757282 | 13838.5 |
| hypothetical protein | ALR00_01018 | Not Available | Negative | 1757361 - 1758332 | 35329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







