Pseudomonas savastanoi pv. retacarpa

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. retacarpa is a Gram-negative, rod-shaped bacterium characterized by its arrangement in singles and its heterotrophic mode of nutrition. As an aerobic organism, it requires oxygen for growth and metabolism, thriving in various habitats where organic compounds are available for energy. The ability to adapt to multiple environments highlights its ecological versatility, potentially allowing it to exploit a range of organic substrates. The distinctive rod shape and single-cell arrangement of P. savastanoi pv. retacarpa provide insights into its physiological and ecological strategies, particularly in its ability to colonize diverse niches. Being a heterotroph, this microbe plays an important role in the decomposition of organic matter, contributing to nutrient cycling in its habitats. Its aerobic nature suggests a preference for environments rich in oxygen, which may include soil, water, and plant surfaces, further enhancing its ecological impact. Understanding the traits of P. savastanoi pv. retacarpa not only sheds light on its biological characteristics but also emphasizes its potential interactions within microbial communities, where it may influence the dynamics of nutrient availability and microbial diversity. Such insights are crucial for appreciating the role of this bacterium in its ecosystem, particularly in relation to its adaptability and functional contributions to the environments it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. retacarpa

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. retacarpa
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Retama sphaerocarpa
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. retacarpa strain ICMP 16947

Gene Summary

Adenine Count

1214292 bp

Thymine Count

1216369 bp

Guanine Count

1685868 bp

Cytosine Count

1679568 bp

Genome Length

5831912 bp

Protein-coding Genes

5273 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative alcohol dehydrogenaseALR00_00183Not AvailableNegative46831 - 4773931995.6
monooxygenase, flavin-binding familyALR00_00184Not AvailableNegative48665 - 5007753570.6
transcriptional regulator, arac familyALR00_00185Not AvailablePositive50300 - 5136740115.1
cinnamyl-alcohol dehydrogenase-like proteinALR00_00186Not AvailablePositive51514 - 5258740235.9
lysr family transcriptional regulatorALR00_100785Not AvailablePositive52520 - 5356038322.7
glutamate-1-semialdehyde aminotransferaseALR00_00187Not AvailableNegative53533 - 5475943001.7
trap-type c4-dicarboxylate transport system, large permease componentALR00_00188Not AvailableNegative54785 - 5607145443.6
trapt dctq-m fusion permease, dicarboxylate transportALR00_00189Not AvailableNegative56068 - 5656217827.2
trap-type c4-dicarboxylate transport system, periplasmic componentALR00_00190Not AvailableNegative56567 - 5755935865.5
ggdef domain-containing proteinALR00_00191Not AvailableNegative59099 - 5977324789.8

Displaying genes 101 – 110 of 5364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Knots in broomCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total