Pseudomonas savastanoi pv. retacarpa

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. retacarpa is a Gram-negative, rod-shaped bacterium characterized by its arrangement in singles and its heterotrophic mode of nutrition. As an aerobic organism, it requires oxygen for growth and metabolism, thriving in various habitats where organic compounds are available for energy. The ability to adapt to multiple environments highlights its ecological versatility, potentially allowing it to exploit a range of organic substrates. The distinctive rod shape and single-cell arrangement of P. savastanoi pv. retacarpa provide insights into its physiological and ecological strategies, particularly in its ability to colonize diverse niches. Being a heterotroph, this microbe plays an important role in the decomposition of organic matter, contributing to nutrient cycling in its habitats. Its aerobic nature suggests a preference for environments rich in oxygen, which may include soil, water, and plant surfaces, further enhancing its ecological impact. Understanding the traits of P. savastanoi pv. retacarpa not only sheds light on its biological characteristics but also emphasizes its potential interactions within microbial communities, where it may influence the dynamics of nutrient availability and microbial diversity. Such insights are crucial for appreciating the role of this bacterium in its ecosystem, particularly in relation to its adaptability and functional contributions to the environments it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. retacarpa

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. retacarpa
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Retama sphaerocarpa
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. retacarpa strain ICMP 16947

Gene Summary

Adenine Count

1214292 bp

Thymine Count

1216369 bp

Guanine Count

1685868 bp

Cytosine Count

1679568 bp

Genome Length

5831912 bp

Protein-coding Genes

5273 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type amino acid transport system, permease componentALR00_01329Not AvailableNegative1068976 - 106962624174.3
amino acid abc transporter, permease proteinALR00_01330Not AvailableNegative1069630 - 107031325198.6
solute-binding component of an abc superfamily transporterALR00_01331Not AvailableNegative1070371 - 107124330710.8
abc transporter, atp-binding proteinALR00_04575Not AvailableNegative1071487 - 107372481223.7
permease component of an abc superfamily dipeptide/oligopeptide/nickel transporterALR00_04576Not AvailableNegative1074064 - 107501434079.1
abc-type dipeptide transport system, periplasmic componentALR00_01334Not AvailableNegative1075011 - 107664260125.1
transcriptional regulator, lysr familyALR00_01335Not AvailableNegative1077090 - 10773057911.58
phage tail collarALR00_02977Not AvailablePositive1077333 - 10775396847.14
hypothetical proteinALR00_02978Not AvailablePositive1077594 - 107790511410.7
putative acetyltransferaseALR00_02979Not AvailableNegative1077906 - 107841518898.6

Displaying genes 1031 – 1040 of 5364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Knots in broomCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total