Pseudomonas sp. R4-35-07

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas sp. R4-35-07 chromosome, complete genome.

Adenine Count

1151068 bp

Thymine Count

1164402 bp

Guanine Count

1763842 bp

Cytosine Count

1757193 bp

Genome Length

5836505 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
polynucleotide adenylyltransferase pcnb	C4J89_RS22440	Not Available	Positive	4906921 - 4908324	53623.0
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	C4J89_RS22445	Not Available	Positive	4908327 - 4908809	17883.5
3-methyl-2-oxobutanoate hydroxymethyltransferase	C4J89_RS22450	Not Available	Positive	4909132 - 4909932	27973.1
pantoate--beta-alanine ligase	C4J89_RS22455	Not Available	Positive	4909929 - 4910780	30871.4
glucose-6-phosphate isomerase	C4J89_RS22460	Not Available	Positive	4911007 - 4912671	61385.0
acetate--coa ligase	C4J89_RS22465	Not Available	Positive	4912776 - 4914713	71006.4
class i sam-dependent rrna methyltransferase	C4J89_RS22470	Not Available	Positive	4914839 - 4915855	37661.0
duf748 domain-containing protein	C4J89_RS22475	Not Available	Positive	4915943 - 4918876	107308.0
bon domain-containing protein	C4J89_RS22480	Not Available	Negative	4919172 - 4919792	20705.9
polyribonucleotide nucleotidyltransferase	C4J89_RS22485	Not Available	Negative	4920089 - 4922194	74906.3

Displaying genes 4471 – 4480 of 5346 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000305	tetrathionateO6S4		Not available	Average224.24Da Monoisotopic223.8588696Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8		Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002759	dTDP-beta-L-rhamnoseC16H24N2O15P2	Not available	Not available	Average546.316Da Monoisotopic546.066289237Da
BASm0003285	5-methyltetrahydropteroyltri-L-glutamateC30H35N9O12		Not available	Average713.663Da Monoisotopic713.2427119Da
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003462	(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12P		`3031-95-6`	Average454.2833Da Monoisotopic454.0737086Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P		Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0010316	N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8P		Not available	Average285.169Da Monoisotopic285.049326Da