Pseudomonas sp. R4-35-07

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas sp. R4-35-07 chromosome, complete genome.

Adenine Count

1151068 bp

Thymine Count

1164402 bp

Guanine Count

1763842 bp

Cytosine Count

1757193 bp

Genome Length

5836505 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
abc transporter permease	C4J89_RS15080	Not Available	Positive	3318086 - 3318907	29525.0
abc transporter atp-binding protein	C4J89_RS15085	Not Available	Positive	3318904 - 3319620	26273.9
ribonucleotide-diphosphate reductase subunit beta	C4J89_RS15090	Not Available	Positive	3319847 - 3321097	47077.1
duf1289 domain-containing protein	C4J89_RS15095	Not Available	Positive	3321249 - 3321737	18954.0
class i sam-dependent methyltransferase	C4J89_RS15100	Not Available	Positive	3321787 - 3322707	33969.8
phosphatidylcholine synthase	C4J89_RS15105	Not Available	Positive	3322856 - 3323572	26654.2
tsup family transporter	C4J89_RS15110	Not Available	Positive	3323771 - 3324550	27055.5
nad(+) diphosphatase	C4J89_RS15115	Not Available	Negative	3324518 - 3325351	30812.8
crotonase/enoyl-coa hydratase family protein	C4J89_RS15120	Not Available	Negative	3325357 - 3326169	29348.4
upf0149 family protein	C4J89_RS15125	Not Available	Positive	3326331 - 3326885	20741.0

Displaying genes 3011 – 3020 of 5346 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000305	tetrathionateO6S4		Not available	Average224.24Da Monoisotopic223.8588696Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8		Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002759	dTDP-beta-L-rhamnoseC16H24N2O15P2	Not available	Not available	Average546.316Da Monoisotopic546.066289237Da
BASm0003285	5-methyltetrahydropteroyltri-L-glutamateC30H35N9O12		Not available	Average713.663Da Monoisotopic713.2427119Da
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003462	(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12P		`3031-95-6`	Average454.2833Da Monoisotopic454.0737086Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P		Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0010316	N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8P		Not available	Average285.169Da Monoisotopic285.049326Da