Pseudomonas sp. R4-35-07

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas sp. R4-35-07 chromosome, complete genome.

Adenine Count

1151068 bp

Thymine Count

1164402 bp

Guanine Count

1763842 bp

Cytosine Count

1757193 bp

Genome Length

5836505 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
atp-dependent dna helicase	C4J89_RS13610	Not Available	Positive	2995080 - 2997338	84509.1
alpha-e domain-containing protein	C4J89_RS13615	Not Available	Negative	2997464 - 2998414	35955.6
circularly permuted type 2 atp-grasp protein	C4J89_RS13620	Not Available	Negative	2998417 - 2999826	52246.7
hypothetical protein	C4J89_RS13625	Not Available	Positive	3000198 - 3000743	20694.0
hypothetical protein	C4J89_RS13630	Not Available	Positive	3000828 - 3001043	7406.09
hypothetical protein	C4J89_RS27185	Not Available	Positive	3001055 - 3001189	4777.14
cation:proton antiporter	C4J89_RS13635	Not Available	Negative	3001283 - 3002629	48189.1
eal domain-containing response regulator	C4J89_RS13640	Not Available	Negative	3002741 - 3003997	46338.1
response regulator	C4J89_RS13645	Not Available	Negative	3004007 - 3004390	14033.5
sensor histidine kinase	C4J89_RS13650	Not Available	Negative	3004375 - 3005715	48741.6

Displaying genes 2711 – 2720 of 5346 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000305	tetrathionateO6S4		Not available	Average224.24Da Monoisotopic223.8588696Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8		Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002759	dTDP-beta-L-rhamnoseC16H24N2O15P2	Not available	Not available	Average546.316Da Monoisotopic546.066289237Da
BASm0003285	5-methyltetrahydropteroyltri-L-glutamateC30H35N9O12		Not available	Average713.663Da Monoisotopic713.2427119Da
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003462	(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12P		`3031-95-6`	Average454.2833Da Monoisotopic454.0737086Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P		Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0010316	N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8P		Not available	Average285.169Da Monoisotopic285.049326Da