Pseudomonas sp. R4-35-07

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas sp. R4-35-07 chromosome, complete genome.

Adenine Count

1151068 bp

Thymine Count

1164402 bp

Guanine Count

1763842 bp

Cytosine Count

1757193 bp

Genome Length

5836505 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
glutathione transferase	C4J89_RS12670	Not Available	Positive	2784765 - 2785397	23249.7
hypothetical protein	C4J89_RS12675	Not Available	Negative	2785372 - 2785644	10136.8
atpase	C4J89_RS12680	Not Available	Positive	2785788 - 2786432	23599.2
hypothetical protein	C4J89_RS12685	Not Available	Positive	2786477 - 2786818	12251.8
creatininase family protein	C4J89_RS12690	Not Available	Negative	2786948 - 2787694	26725.8
murein l,d-transpeptidase catalytic domain family protein	C4J89_RS12695	Not Available	Negative	2787725 - 2788453	26635.0
murein l,d-transpeptidase	C4J89_RS12700	Not Available	Positive	2788493 - 2790094	59114.1
sensor histidine kinase	C4J89_RS12705	Not Available	Negative	2790245 - 2791636	51518.3
response regulator transcription factor	C4J89_RS12710	Not Available	Negative	2791614 - 2792297	25342.8
hypothetical protein	C4J89_RS12715	Not Available	Positive	2792688 - 2793593	31184.9

Displaying genes 2521 – 2530 of 5346 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000305	tetrathionateO6S4		Not available	Average224.24Da Monoisotopic223.8588696Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8		Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002759	dTDP-beta-L-rhamnoseC16H24N2O15P2	Not available	Not available	Average546.316Da Monoisotopic546.066289237Da
BASm0003285	5-methyltetrahydropteroyltri-L-glutamateC30H35N9O12		Not available	Average713.663Da Monoisotopic713.2427119Da
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003462	(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12P		`3031-95-6`	Average454.2833Da Monoisotopic454.0737086Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P		Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0010316	N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8P		Not available	Average285.169Da Monoisotopic285.049326Da