Pseudomonas sp. R4-35-07

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas sp. R4-35-07 chromosome, complete genome.

Adenine Count

1151068 bp

Thymine Count

1164402 bp

Guanine Count

1763842 bp

Cytosine Count

1757193 bp

Genome Length

5836505 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
efflux rnd transporter permease subunit	C4J89_RS11255	Not Available	Negative	2427554 - 2430652	110155.0
efflux rnd transporter periplasmic adaptor subunit	C4J89_RS11260	Not Available	Negative	2430659 - 2431801	41062.1
response regulator transcription factor	C4J89_RS11265	Not Available	Positive	2432090 - 2432791	26223.7
atp-binding protein	C4J89_RS11270	Not Available	Positive	2432795 - 2434111	49546.9
class i sam-dependent methyltransferase	C4J89_RS11275	Not Available	Positive	2434164 - 2434943	27864.3
sulfite exporter taue/safe family protein	C4J89_RS11280	Not Available	Positive	2435026 - 2435811	27397.5
acyl-coa dehydrogenase family protein	C4J89_RS11285	Not Available	Negative	2436014 - 2437252	44820.5
dimethylsulfone monooxygenase sfng	C4J89_RS11290	Not Available	Positive	2437521 - 2438606	39810.0
type i methionyl aminopeptidase	C4J89_RS11295	Not Available	Negative	2438610 - 2439365	27701.5
pard-like family protein	C4J89_RS11300	Not Available	Negative	2439362 - 2439565	7635.4

Displaying genes 2241 – 2250 of 5346 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000305	tetrathionateO6S4		Not available	Average224.24Da Monoisotopic223.8588696Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8		Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002759	dTDP-beta-L-rhamnoseC16H24N2O15P2	Not available	Not available	Average546.316Da Monoisotopic546.066289237Da
BASm0003285	5-methyltetrahydropteroyltri-L-glutamateC30H35N9O12		Not available	Average713.663Da Monoisotopic713.2427119Da
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003462	(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12P		`3031-95-6`	Average454.2833Da Monoisotopic454.0737086Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P		Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0010316	N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8P		Not available	Average285.169Da Monoisotopic285.049326Da