Pseudomonas sp. R4-35-07

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas sp. R4-35-07 chromosome, complete genome.

Adenine Count

1151068 bp

Thymine Count

1164402 bp

Guanine Count

1763842 bp

Cytosine Count

1757193 bp

Genome Length

5836505 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
glxa family transcriptional regulator	C4J89_RS09390	Not Available	Positive	2027461 - 2028426	34809.0
alpha/beta fold hydrolase	C4J89_RS09395	Not Available	Negative	2028415 - 2029326	33602.0
glycoside hydrolase family 15 protein	C4J89_RS09400	Not Available	Negative	2029314 - 2031140	68662.2
glucose 1-dehydrogenase	C4J89_RS09405	Not Available	Negative	2031133 - 2031933	27638.1
hypothetical protein	C4J89_RS27135	Not Available	Positive	2032345 - 2033142	28860.9
hypothetical protein	C4J89_RS09420	Not Available	Positive	2033753 - 2034697	34413.2
mfs transporter	C4J89_RS09425	Not Available	Negative	2034752 - 2035903	38752.8
diaminopimelate epimerase	C4J89_RS09430	Not Available	Positive	2036132 - 2037115	33902.1
type vi secretion system tip protein tssi/vgrg	C4J89_RS09435	Not Available	Positive	2037408 - 2039426	74602.6
duf4123 domain-containing protein	C4J89_RS09440	Not Available	Positive	2039426 - 2040262	31782.8

Displaying genes 1861 – 1870 of 5346 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000305	tetrathionateO6S4		Not available	Average224.24Da Monoisotopic223.8588696Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8		Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002759	dTDP-beta-L-rhamnoseC16H24N2O15P2	Not available	Not available	Average546.316Da Monoisotopic546.066289237Da
BASm0003285	5-methyltetrahydropteroyltri-L-glutamateC30H35N9O12		Not available	Average713.663Da Monoisotopic713.2427119Da
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003462	(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12P		`3031-95-6`	Average454.2833Da Monoisotopic454.0737086Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P		Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0010316	N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8P		Not available	Average285.169Da Monoisotopic285.049326Da