Pseudomonas sp. R4-35-07

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Image source: Wikipedia/Wikimedia

Pseudomonas sp. R4-35-07 chromosome, complete genome.

Adenine Count

1151068 bp

Thymine Count

1164402 bp

Guanine Count

1763842 bp

Cytosine Count

1757193 bp

Genome Length

5836505 bp

Protein-coding Genes

5204 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	C4J89_RS07340	Not Available	Positive	1605209 - 1605487	9177.2
cyclic nucleotide-binding domain-containing protein	C4J89_RS07345	Not Available	Negative	1605484 - 1605957	17111.9
s9 family peptidase	C4J89_RS07350	Not Available	Negative	1606056 - 1608098	76113.3
mfs transporter	C4J89_RS07355	Not Available	Positive	1608123 - 1608650	19939.6
class ii glutamine amidotransferase	C4J89_RS07360	Not Available	Positive	1608681 - 1609457	28923.2
duf2937 family protein	C4J89_RS07365	Not Available	Positive	1609468 - 1610010	20212.5
lysr family transcriptional regulator	C4J89_RS07370	Not Available	Negative	1610118 - 1611032	33720.4
5-oxoprolinase subunit pxpa	C4J89_RS07375	Not Available	Positive	1611210 - 1611950	26377.4
5-oxoprolinase subunit pxpb	C4J89_RS07380	Not Available	Positive	1611947 - 1612651	25315.7
biotin-dependent carboxyltransferase family protein	C4J89_RS07385	Not Available	Positive	1612648 - 1613553	31979.8

Displaying genes 1481 – 1490 of 5346 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000305	tetrathionateO6S4		Not available	Average224.24Da Monoisotopic223.8588696Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8		Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002759	dTDP-beta-L-rhamnoseC16H24N2O15P2	Not available	Not available	Average546.316Da Monoisotopic546.066289237Da
BASm0003285	5-methyltetrahydropteroyltri-L-glutamateC30H35N9O12		Not available	Average713.663Da Monoisotopic713.2427119Da
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003462	(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12P		`3031-95-6`	Average454.2833Da Monoisotopic454.0737086Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P		Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0010316	N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8P		Not available	Average285.169Da Monoisotopic285.049326Da