Lachnospiraceae bacterium 3_1_57FAA_CT1

Non-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

The Lachnospiraceae bacterium 3_1_57FAA_CT1 is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, classified as a Chemoheterotroph, and can be found in various body sites across different species, including the gastrointestinal tract, skin, and oral cavity, of humans, animals, and insects. As a Chemoheterotroph, this bacterium relies on organic compounds for energy and carbon, breaking down complex molecules into simpler ones. Its rod shape allows for efficient movement and colonization in diverse environments. The bacterium's Gram-positive cell wall provides protection against external stresses, while its mesophilic nature enables it to grow optimally at moderate temperatures. As an Obligate Anaerobe, the Lachnospiraceae bacterium 3_1_57FAA_CT1 requires the absence of oxygen to survive, which is consistent with its presence in low-oxygen environments such as the gut.The bacterium's ability to inhabit various body sites is likely due to its versatile metabolic capabilities, allowing it to adapt to different nutrient availability and environmental conditions. Its presence in the gastrointestinal tract, for example, suggests a role in the breakdown of complex carbohydrates and the production of short-chain fatty acids, which can provide energy to the host. The Lachnospiraceae bacterium 3_1_57FAA_CT1 has been implicated in the production of certain metabolites that can influence host health, and its unique metabolic profile has led to investigations into its potential as a probiotic agent, with studies exploring its ability to modulate the immune system and produce anti-inflammatory compounds.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium 3_1_57FAA_CT1


Gene Summary

Adenine Count

1996188 bp

Thymine Count

2102249 bp

Guanine Count

1666875 bp

Cytosine Count

1932742 bp

Genome Length

7698054 bp

Protein-coding Genes

6535 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+47 - 1566Not Available
hypothetical proteinHMPREF0994_06748Not Available+1518 - 231830582.3
imidazole glycerol phosphate synthase, glutamine amidotransferase subunitHMPREF0994_06747Not Available+2400 - 300822020.4
imidazole glycerol phosphate synthase subunit hisfHMPREF0994_06746Not Available+3024 - 378527621.3
uracil-dna glycosylaseHMPREF0994_06745Not Available+3833 - 451025882.9
hypothetical proteinHMPREF0994_06744Not Available+4538 - 630767006.8
hypothetical proteinHMPREF0994_06743Not Available+6457 - 718527265.1
diaminopimelate decarboxylaseHMPREF0994_06742Not Available+7188 - 845947537.0
Trna-leuNot AvailableNot Available+8580 - 8662Not Available
hypothetical proteinHMPREF0994_06741Not Available+9187 - 1090267161.1

Displaying genes 1 – 10 of 6599 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

17 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014051Capric acidC10H20O2Chemical structure of Capric acid334-48-5
Average172.2646Da
Monoisotopic172.146329884Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014068Nicotinic acidC6H5NO2Chemical structure of Nicotinic acid59-67-6
Average123.1094Da
Monoisotopic123.032028409Da
BASm0014108Erythronic acidC4H8O5Chemical structure of Erythronic acidNULL
Average136.1033Da
Monoisotopic136.037173366Da
BASm0014111OrotidineC10H12N2O8Chemical structure of OrotidineNULL
Average288.2109Da
Monoisotopic288.05936537Da
BASm0014156N-Acetyl-L-methionineC7H13NO3SChemical structure of N-Acetyl-L-methionineNULL
Average191.248Da
Monoisotopic191.061613977Da
BASm0014194Dodecanoic acidC12H24O2Chemical structure of Dodecanoic acidNULL
Average200.3178Da
Monoisotopic200.177630012Da
BASm0014214Indole-3-propionic acidC11H11NO2Chemical structure of Indole-3-propionic acidNULL
Average189.2105Da
Monoisotopic189.078978601Da
BASm0014241p-Cresol glucuronideC13H16O7Chemical structure of p-Cresol glucuronideNULL
Average284.2619Da
Monoisotopic284.089602866Da

Displaying 1–10 of 17 metabolites