Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentalenene oxygenase | PAM7971_00934 | Not Available | Negative | 978257 - 979633 | 51809.5 |
| hypothetical protein | PAM7971_00935 | Not Available | Negative | 979630 - 980853 | 45474.0 |
| thiol:disulfide interchange protein dsbd precursor | PAM7971_00936 | Not Available | Negative | 980926 - 981741 | 29026.4 |
| ribonuclease e | PAM7971_00937 | Not Available | Negative | 981853 - 984867 | 110202.0 |
| glycerophosphodiester phosphodiesterase | PAM7971_00938 | Not Available | Positive | 985543 - 986760 | 43511.9 |
| fructose-1-phosphate phosphatase yqab | PAM7971_00939 | Not Available | Negative | 986867 - 987622 | 26930.6 |
| c4-dicarboxylate transport transcriptional regulatory protein dctd | PAM7971_00940 | Not Available | Negative | 987573 - 988910 | 49217.5 |
| c4-dicarboxylate transport sensor protein dctb | PAM7971_00941 | Not Available | Negative | 989008 - 990777 | 64234.1 |
| phosphoribosylformylglycinamidine synthase 1 | PAM7971_00942 | Not Available | Negative | 990947 - 991615 | 23461.8 |
| phosphoribosylformylglycinamidine synthase subunit purs | PAM7971_00943 | Not Available | Negative | 991861 - 992091 | 8206.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
