Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | PAM7971_00914 | Not Available | Negative | 957913 - 958878 | 34265.9 |
| (s)-mandelate dehydrogenase | PAM7971_00915 | Not Available | Positive | 959541 - 960746 | 44346.4 |
| putative oxidoreductase czco | PAM7971_00916 | Not Available | Positive | 960965 - 962215 | 46614.2 |
| 3-dehydroquinate dehydratase | PAM7971_00917 | Not Available | Positive | 962322 - 962768 | 16052.3 |
| glyoxylate/hydroxypyruvate reductase a | PAM7971_00918 | Not Available | Positive | 962765 - 963700 | 33654.3 |
| spermidine/putrescine-binding periplasmic protein precursor | PAM7971_00919 | Not Available | Positive | 963941 - 964966 | 37543.1 |
| spermidine/putrescine transport system permease protein potb | PAM7971_00920 | Not Available | Positive | 965034 - 965888 | 30672.3 |
| putative 2-aminoethylphosphonate transport system permease protein phnv | PAM7971_00921 | Not Available | Positive | 965888 - 966697 | 29771.1 |
| spermidine/putrescine import atp-binding protein pota | PAM7971_00922 | Not Available | Positive | 966687 - 967808 | 40818.9 |
| phthiocerol synthesis polyketide synthase type i ppsc | PAM7971_00923 | Not Available | Positive | 967805 - 968806 | 34731.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
