Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator cmpr | PAM7971_00904 | Not Available | Positive | 948008 - 948910 | 32012.8 |
| 2-(hydroxymethyl)glutarate dehydrogenase | PAM7971_00905 | Not Available | Positive | 949015 - 949875 | 28973.8 |
| putative aldehyde dehydrogenase alda | PAM7971_00906 | Not Available | Positive | 949877 - 951385 | 52291.7 |
| serine acetyltransferase | PAM7971_00907 | Not Available | Positive | 951397 - 952128 | 25193.2 |
| hypothetical protein | PAM7971_00908 | Not Available | Positive | 952125 - 953009 | 32692.2 |
| hypothetical protein | PAM7971_00909 | Not Available | Negative | 952901 - 953305 | 14954.2 |
| major facilitator superfamily protein | PAM7971_00910 | Not Available | Negative | 953850 - 955169 | 47015.5 |
| sialic acid trap transporter permease protein siat | PAM7971_00911 | Not Available | Negative | 955330 - 956610 | 44154.8 |
| tripartite atp-independent periplasmic transporters, dctq component | PAM7971_00912 | Not Available | Negative | 956607 - 957119 | 18004.1 |
| arylmalonate decarboxylase | PAM7971_00913 | Not Available | Negative | 957116 - 957916 | 28522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
