Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | PAM7971_00894 | Not Available | Negative | 937234 - 938544 | 46513.4 |
| tripartite atp-independent periplasmic transporters, dctq component | PAM7971_00895 | Not Available | Negative | 938567 - 939091 | 18739.2 |
| sialic acid-binding periplasmic protein siap precursor | PAM7971_00896 | Not Available | Negative | 939159 - 940139 | 35285.1 |
| transcriptional regulator beti | PAM7971_00897 | Not Available | Negative | 940400 - 941017 | 23231.0 |
| hypothetical protein | PAM7971_00898 | Not Available | Negative | 942113 - 942790 | 24519.0 |
| hypothetical protein | PAM7971_00899 | Not Available | Positive | 943407 - 943523 | 4363.41 |
| inner membrane protein ynjf | PAM7971_00900 | Not Available | Positive | 943516 - 944202 | 24474.6 |
| hypothetical protein | PAM7971_00901 | Not Available | Positive | 944199 - 945383 | 42655.3 |
| inner membrane abc transporter permease protein ynjc | PAM7971_00902 | Not Available | Positive | 945380 - 947086 | 61213.6 |
| sulfate/thiosulfate import atp-binding protein cysa | PAM7971_00903 | Not Available | Positive | 947083 - 947733 | 22904.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
