Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate-binding periplasmic protein precursor | PAM7971_00874 | Not Available | Positive | 919084 - 920148 | 38634.7 |
| sialic acid trap transporter permease protein siat | PAM7971_00875 | Not Available | Positive | 920206 - 920739 | 19815.2 |
| sialic acid trap transporter permease protein siat | PAM7971_00876 | Not Available | Positive | 920743 - 922053 | 46019.1 |
| d-amino acid dehydrogenase small subunit | PAM7971_00877 | Not Available | Positive | 922053 - 923294 | 44586.6 |
| (2r)-3-sulfolactate dehydrogenase (nadp(+)) | PAM7971_00878 | Not Available | Negative | 923354 - 924370 | 36205.5 |
| hth-type transcriptional regulator lutr | PAM7971_00879 | Not Available | Positive | 924533 - 925213 | 25652.9 |
| proline racemase | PAM7971_00880 | Not Available | Negative | 925249 - 926280 | 36864.0 |
| glutamine transport atp-binding protein glnq | PAM7971_00881 | Not Available | Negative | 926290 - 927012 | 26282.8 |
| glutamine transport system permease protein glnp | PAM7971_00882 | Not Available | Negative | 927009 - 927671 | 24235.2 |
| inner membrane amino-acid abc transporter permease protein yecs | PAM7971_00883 | Not Available | Negative | 927682 - 928311 | 23210.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
