Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase yqhd | PAM7971_00864 | Not Available | Negative | 908620 - 909777 | 41239.3 |
| hth-type transcriptional repressor nemr | PAM7971_00865 | Not Available | Negative | 909920 - 910510 | 21724.8 |
| helix-turn-helix domain protein | PAM7971_00866 | Not Available | Positive | 910586 - 911023 | 15531.1 |
| putative permease | PAM7971_00867 | Not Available | Positive | 911078 - 912130 | 36083.4 |
| tripartite tricarboxylate transporter tcta family protein | PAM7971_00868 | Not Available | Negative | 912221 - 913720 | 52475.8 |
| tripartite tricarboxylate transporter tctb family protein | PAM7971_00869 | Not Available | Negative | 913728 - 914201 | 16659.3 |
| tripartite tricarboxylate transporter family receptor | PAM7971_00870 | Not Available | Negative | 914300 - 915271 | 33639.9 |
| hth-type transcriptional regulator gbpr | PAM7971_00871 | Not Available | Positive | 915543 - 916463 | 33370.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PAM7971_00872 | Not Available | Positive | 917114 - 918070 | 34324.1 |
| 4-hydroxyproline epimerase | PAM7971_00873 | Not Available | Positive | 918061 - 919017 | 33443.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
