Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | PAM7971_00053 | Not Available | Positive | 47285 - 48568 | 45254.2 |
| dihydroorotate dehydrogenase b (nad(+)), electron transfer subunit | PAM7971_00054 | Not Available | Positive | 48583 - 49425 | 30620.3 |
| dihydroorotate dehydrogenase b (nad(+)), catalytic subunit | PAM7971_00055 | Not Available | Positive | 49425 - 50375 | 33393.5 |
| hydantoin utilization protein c | PAM7971_00056 | Not Available | Positive | 50372 - 51649 | 45941.5 |
| orotate phosphoribosyltransferase | PAM7971_00057 | Not Available | Positive | 51664 - 52356 | 25187.4 |
| hypothetical protein | PAM7971_00058 | Not Available | Positive | 52372 - 52689 | 11857.0 |
| virulence regulon transcriptional activator virf | PAM7971_00059 | Not Available | Positive | 53109 - 54071 | 34882.7 |
| ferrichrome-iron receptor precursor | PAM7971_00060 | Not Available | Positive | 54114 - 56252 | 77160.3 |
| iron(3+)-hydroxamate-binding protein fhud precursor | PAM7971_00061 | Not Available | Positive | 56312 - 57172 | 30388.6 |
| iron(3+)-hydroxamate import system permease protein fhub | PAM7971_00062 | Not Available | Positive | 57169 - 59136 | 65615.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
