Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hth-type transcriptional regulator yjir | PAM7971_00824 | Not Available | Negative | 866379 - 867752 | 50216.0 |
| succinate-semialdehyde dehydrogenase | PAM7971_00825 | Not Available | Positive | 868405 - 869889 | 52965.3 |
| taurine--pyruvate aminotransferase | PAM7971_00826 | Not Available | Positive | 869913 - 871289 | 49838.2 |
| Trna-val | Not Available | Not Available | Positive | 871430 - 871505 | Not Available |
| bacterial dna-binding protein | PAM7971_00828 | Not Available | Negative | 871572 - 871976 | 14150.9 |
| lon protease | PAM7971_00829 | Not Available | Negative | 872236 - 874641 | 88172.9 |
| hypothetical protein | PAM7971_00830 | Not Available | Negative | 874981 - 875301 | 11151.5 |
| queuine trna-ribosyltransferase | PAM7971_00831 | Not Available | Negative | 875503 - 876633 | 41296.6 |
| ycii-related domain protein | PAM7971_00832 | Not Available | Negative | 876747 - 877046 | 10867.1 |
| hypothetical protein | PAM7971_00833 | Not Available | Positive | 877172 - 877534 | 13074.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
