Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_00814 | Not Available | Positive | 857494 - 857772 | 10095.7 |
| succinylglutamate desuccinylase / aspartoacylase family protein | PAM7971_00815 | Not Available | Negative | 857864 - 858865 | 35315.5 |
| creatinase | PAM7971_00816 | Not Available | Negative | 858850 - 860034 | 44221.9 |
| l-lysine cyclodeaminase | PAM7971_00817 | Not Available | Negative | 860031 - 861026 | 34667.6 |
| l-threonine dehydratase catabolic tdcb | PAM7971_00818 | Not Available | Negative | 861023 - 862000 | 33684.8 |
| maleate isomerase | PAM7971_00819 | Not Available | Negative | 861997 - 862791 | 27847.7 |
| stress response protein nhax | PAM7971_00820 | Not Available | Negative | 862800 - 863237 | 15418.6 |
| sialic acid trap transporter permease protein siat | PAM7971_00821 | Not Available | Negative | 863247 - 864530 | 45060.1 |
| tripartite atp-independent periplasmic transporters, dctq component | PAM7971_00822 | Not Available | Negative | 864534 - 865160 | 23079.7 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | PAM7971_00823 | Not Available | Negative | 865231 - 866250 | 36881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
