Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | PAM7971_00804 | Not Available | Negative | 843759 - 846269 | 91755.7 |
| n-acetylmuramoyl-l-alanine amidase amia precursor | PAM7971_00805 | Not Available | Negative | 846449 - 847684 | 44446.0 |
| aspartate aminotransferase | PAM7971_00806 | Not Available | Negative | 847790 - 848935 | 41229.3 |
| disulfide bond formation protein d precursor | PAM7971_00807 | Not Available | Positive | 849095 - 849862 | 27548.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | PAM7971_00808 | Not Available | Negative | 849943 - 851076 | 40239.3 |
| hypothetical protein | PAM7971_00809 | Not Available | Negative | 851227 - 852432 | 42763.4 |
| 5-aminolevulinate synthase | PAM7971_00810 | Not Available | Negative | 852525 - 853748 | 44265.0 |
| n-formyl-4-amino-5-aminomethyl-2- methylpyrimidinedeformylase | PAM7971_00811 | Not Available | Positive | 853999 - 855393 | 50534.0 |
| peptidase family s41 | PAM7971_00812 | Not Available | Positive | 855429 - 856754 | 47669.8 |
| putative phosphoserine phosphatase 2 | PAM7971_00813 | Not Available | Negative | 856775 - 857377 | 21574.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
