Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | PAM7971_00784 | Not Available | Negative | 820642 - 822249 | 60525.8 |
| l-glyceraldehyde 3-phosphate reductase | PAM7971_00785 | Not Available | Negative | 822249 - 823289 | 38138.1 |
| 1,5-anhydro-d-fructose reductase | PAM7971_00786 | Not Available | Negative | 823458 - 824597 | 40254.2 |
| xylose isomerase-like tim barrel | PAM7971_00787 | Not Available | Negative | 824619 - 825374 | 27717.7 |
| hypothetical protein | PAM7971_00788 | Not Available | Negative | 825472 - 826161 | 25494.1 |
| exo-beta-d-glucosaminidase precursor | PAM7971_00789 | Not Available | Negative | 826158 - 828569 | 90576.7 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PAM7971_00790 | Not Available | Negative | 828696 - 829778 | 39080.4 |
| l-arabinose transport system permease protein araq | PAM7971_00791 | Not Available | Negative | 829783 - 830703 | 33804.5 |
| lactose transport system permease protein lacf | PAM7971_00792 | Not Available | Negative | 830700 - 831629 | 34461.9 |
| putative sugar-binding periplasmic protein precursor | PAM7971_00793 | Not Available | Negative | 831735 - 832967 | 43024.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
