Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | PAM7971_00774 | Not Available | Negative | 807120 - 808100 | 35656.5 |
| uronate isomerase | PAM7971_00775 | Not Available | Negative | 808136 - 809545 | 52837.2 |
| putative hth-type transcriptional regulator ydfh | PAM7971_00776 | Not Available | Positive | 809803 - 810513 | 26817.1 |
| 2-dehydro-3-deoxygluconokinase | PAM7971_00777 | Not Available | Positive | 810503 - 811408 | 32742.7 |
| biofilm dispersion protein bdla | PAM7971_00778 | Not Available | Positive | 811563 - 813581 | 73362.9 |
| nadp-dependent fatty aldehyde dehydrogenase | PAM7971_00779 | Not Available | Negative | 813651 - 815165 | 53107.3 |
| xylose isomerase | PAM7971_00780 | Not Available | Negative | 815540 - 816844 | 49076.6 |
| xylulose kinase | PAM7971_00781 | Not Available | Negative | 816841 - 818280 | 50028.2 |
| n-acetylglucosamine repressor | PAM7971_00782 | Not Available | Positive | 818557 - 819777 | 43857.8 |
| translocation protein tolb | PAM7971_00783 | Not Available | Negative | 819766 - 820617 | 31346.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
