Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose import atp-binding protein xylg | PAM7971_00764 | Not Available | Negative | 796217 - 797734 | 54819.9 |
| multiple sugar-binding periplasmic receptor chve precursor | PAM7971_00765 | Not Available | Negative | 797858 - 798925 | 37457.2 |
| hth-type transcriptional regulator gbpr | PAM7971_00766 | Not Available | Positive | 799179 - 800153 | 34831.0 |
| mannonate dehydratase | PAM7971_00767 | Not Available | Negative | 800460 - 801653 | 44093.4 |
| mannitol 2-dehydrogenase | PAM7971_00768 | Not Available | Negative | 801646 - 803097 | 51983.7 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase | PAM7971_00769 | Not Available | Negative | 803180 - 803923 | 25617.7 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase 1 | PAM7971_00770 | Not Available | Negative | 803934 - 804764 | 30614.4 |
| cupin domain protein | PAM7971_00771 | Not Available | Negative | 804814 - 805131 | 11763.7 |
| sialic acid trap transporter permease protein siat | PAM7971_00772 | Not Available | Negative | 805166 - 806476 | 46127.4 |
| tripartite atp-independent periplasmic transporters, dctq component | PAM7971_00773 | Not Available | Negative | 806478 - 807008 | 19655.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
