Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isovaleryl-homoserine lactone synthase | PAM7971_00754 | Not Available | Negative | 783582 - 784367 | 29048.1 |
| hypothetical protein | PAM7971_00755 | Not Available | Negative | 784364 - 784516 | 5934.1 |
| sensor histidine kinase yycg | PAM7971_00756 | Not Available | Positive | 784636 - 785991 | 50451.4 |
| sensor histidine kinase rcsc | PAM7971_00757 | Not Available | Negative | 786112 - 787920 | 66077.2 |
| adenine deaminase | PAM7971_00758 | Not Available | Negative | 788396 - 790105 | 61951.7 |
| siroheme synthase | PAM7971_00759 | Not Available | Negative | 790116 - 791096 | 35441.8 |
| l-arabinose 1-dehydrogenase | PAM7971_00760 | Not Available | Negative | 791287 - 792219 | 33546.0 |
| l-arabonate dehydratase | PAM7971_00761 | Not Available | Negative | 792242 - 793987 | 62456.0 |
| fumarylacetoacetate (faa) hydrolase family protein | PAM7971_00762 | Not Available | Negative | 793996 - 794988 | 35232.6 |
| xylose transport system permease protein xylh | PAM7971_00763 | Not Available | Negative | 794994 - 796205 | 42539.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
