Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trna-dihydrouridine synthase | PAM7971_00734 | Not Available | Negative | 764922 - 765818 | 32465.1 |
| hypothetical protein | PAM7971_00735 | Not Available | Positive | 766332 - 766601 | 9697.63 |
| hypothetical protein | PAM7971_00736 | Not Available | Negative | 767000 - 767194 | 7067.62 |
| hypothetical protein | PAM7971_00737 | Not Available | Negative | 767340 - 767675 | 12842.3 |
| hypothetical protein | PAM7971_00738 | Not Available | Negative | 767721 - 767864 | 5418.4 |
| hth-type transcriptional regulator lutr | PAM7971_00739 | Not Available | Positive | 768067 - 768810 | 27404.4 |
| methionine gamma-lyase | PAM7971_00740 | Not Available | Positive | 768807 - 769958 | 41416.8 |
| sn-glycerol-3-phosphate-binding periplasmic protein ugpb precursor | PAM7971_00741 | Not Available | Positive | 770005 - 771264 | 45655.6 |
| trehalose transport system permease protein suga | PAM7971_00742 | Not Available | Positive | 771261 - 772196 | 35315.8 |
| trehalose transport system permease protein sugb | PAM7971_00743 | Not Available | Positive | 772207 - 773046 | 30591.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
