Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd precursor | PAM7971_00694 | Not Available | Positive | 720873 - 723095 | 81154.5 |
| chaperone sura precursor | PAM7971_00695 | Not Available | Positive | 723191 - 724456 | 45008.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | PAM7971_00696 | Not Available | Positive | 724453 - 725460 | 35541.0 |
| ribosomal rna small subunit methyltransferase a | PAM7971_00697 | Not Available | Positive | 725472 - 726314 | 30803.6 |
| hypothetical protein | PAM7971_00698 | Not Available | Negative | 726429 - 727193 | 28920.0 |
| release factor glutamine methyltransferase | PAM7971_00699 | Not Available | Negative | 727492 - 728343 | 30343.6 |
| peptide chain release factor 1 | PAM7971_00700 | Not Available | Negative | 728343 - 729392 | 38422.6 |
| hypothetical protein | PAM7971_00701 | Not Available | Negative | 729473 - 729895 | 15064.2 |
| hypothetical protein | PAM7971_00702 | Not Available | Negative | 730080 - 730670 | 20167.2 |
| abc transporter atp-binding protein uup | PAM7971_00703 | Not Available | Negative | 730897 - 732711 | 66766.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
