Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator hexr | PAM7971_00674 | Not Available | Negative | 700191 - 701048 | 30936.7 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | PAM7971_00675 | Not Available | Positive | 701169 - 702488 | 47294.4 |
| 3-keto-5-aminohexanoate cleavage enzyme | PAM7971_00676 | Not Available | Positive | 702485 - 703276 | 28417.7 |
| hypothetical protein | PAM7971_00677 | Not Available | Negative | 703392 - 703973 | 19012.4 |
| putative acid--amine ligase ygic | PAM7971_00678 | Not Available | Negative | 703992 - 705218 | 45540.4 |
| blue copper oxidase cueo precursor | PAM7971_00679 | Not Available | Positive | 705429 - 706826 | 50536.2 |
| s-formylglutathione hydrolase | PAM7971_00680 | Not Available | Negative | 706905 - 707735 | 30310.4 |
| s-(hydroxymethyl)glutathione dehydrogenase | PAM7971_00681 | Not Available | Negative | 707800 - 708924 | 39890.0 |
| hypothetical protein | PAM7971_00682 | Not Available | Negative | 709198 - 709413 | 7949.42 |
| alanine dehydrogenase | PAM7971_00683 | Not Available | Negative | 709721 - 710839 | 38481.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
