Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pacificibacter marinus
Accession NumberFWFW00000000.1
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase 1 | PAM7971_00033 | Not Available | + | 25469 - 26248 | 28345.0 |
| copper homeostasis protein cutc | PAM7971_00034 | Not Available | - | 26218 - 26952 | 25008.4 |
| major facilitator superfamily protein | PAM7971_00035 | Not Available | - | 26949 - 28151 | 42018.4 |
| hypothetical protein | PAM7971_00036 | Not Available | - | 28154 - 29587 | 50470.1 |
| beta-hexosaminidase | Not Available | Not Available | - | 29656 - 31560 | 70644.5 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_00038 | Not Available | - | 31585 - 32361 | 26742.0 |
| putative hth-type transcriptional regulator ybbh | PAM7971_00039 | Not Available | - | 32427 - 33341 | 32510.9 |
| hypothetical protein | PAM7971_00040 | Not Available | + | 33535 - 34041 | 19189.3 |
| hypothetical protein | PAM7971_00041 | Not Available | + | 34044 - 35549 | 53556.5 |
| d-threonine aldolase | PAM7971_00042 | Not Available | + | 35551 - 36639 | 38017.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.