Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flig | PAM7971_00624 | Not Available | Negative | 643176 - 644378 | 42656.4 |
| adenylosuccinate lyase | PAM7971_00625 | Not Available | Negative | 644481 - 645782 | 48672.9 |
| gaf domain protein | PAM7971_00626 | Not Available | Positive | 645941 - 646375 | 15454.8 |
| glutamine synthetase | PAM7971_00627 | Not Available | Negative | 646495 - 647901 | 52108.7 |
| nitrogen regulatory protein p-ii | PAM7971_00628 | Not Available | Negative | 647970 - 648308 | 12183.7 |
| bifunctional nad(p)h-hydrate repair enzyme nnr | PAM7971_00629 | Not Available | Positive | 648480 - 650066 | 55313.6 |
| Trna-leu | Not Available | Not Available | Positive | 650253 - 650336 | Not Available |
| transposase dde domain protein | PAM7971_00631 | Not Available | Positive | 650744 - 652129 | 52485.4 |
| hypothetical protein | PAM7971_00632 | Not Available | Positive | 652414 - 653301 | 32940.9 |
| ski2-like helicase | PAM7971_00633 | Not Available | Positive | 653294 - 656581 | 119178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
